The only pokemon game I want to see is a big open world JRPG game co-develpoed with Monolith Soft. Find a way to translate the stats of pokemon from the handheld series over, yet make the gameplay unique to the console game. two different gameplay experiences, reasons to own two different consoles. I'll let the smart people at Nintendo figure out the gameplay of the console game, but Mnolith Soft could make something amazing in this world.
I'd even be ok with Them even focusing on making a JRPG in the Pokemon Universe that focuses on some new kind of combat mechanics. Take the Aura Guardian story line with Lucario and stuff from the show. Make up some interesting lore, nail the gameplay, and you could implement the whole pokemon trainer thing as a side mission in the game. they would already have the models for all the pokemon to battle anyway from being in game.